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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009952.1_4409_4501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4409 - 4501

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

CTCTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GTGACGCCACCC

Flanking Amino Acid:

HHRPVIAVHSGIARSPHPSS

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

57.1

42.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

79.2

0.66

0.8

31.9

Minor 5ss

31.7

-2.1

3.3

39.7

45.8

Minor BPS

34.4

-1.2

2.4

44.87

42.9

Associated Gene:

Gene:

NFIC

Ensembl Gene ID:

ENSAPLG00000023294

Chromosome:

PEDO01009952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039516

21 - 10593

10573