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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009952.1_4687_6518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4687 - 6518

Intron Length:

1832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TGTTTTTTGTCT

Flanking Amino Acid:

CDPSNQQPGPLNGSGQVKVP

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.8

38.7

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

71.3

0.48

61.8

44.4

Minor 5ss

34.3

-1.8

3.7

50.6

46.1

Minor BPS

46.4

-0.2

3.4

78.8

37.8

Associated Gene:

Gene:

NFIC

Ensembl Gene ID:

ENSAPLG00000023294

Chromosome:

PEDO01009952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039516

21 - 10593

10573