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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009952.1_7887_10065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7887 - 10065

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

ACAGCACTAACG

Flanking Amino Acid:

RDPGSIYQAQSWYLG*

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

62.5

43.9

Major BPS

64.5

0.36

65.2

28.2

Major PPT

76.3

0.59

0.9

73.5

31.5

Minor 5ss

25.9

-2.8

2.9

30.2

42.8

Minor BPS

44.6

-0.5

48.69

44.3

Associated Gene:

Gene:

NFIC

Ensembl Gene ID:

ENSAPLG00000023294

Chromosome:

PEDO01009952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039516

21 - 10593

10573