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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009952.1_977_1329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

977 - 1329

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCGGG

5'SS Class:

major

3'SS Sequence:

CTCTCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CCCCTCTCAGCG

Flanking Amino Acid:

DQEDSKPITLDSTDFQESFV

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

47.1

Major BPS

58.6

0.22

1.5

38.9

Major PPT

77.1

0.61

0.9

72.2

32.4

Minor 5ss

35.3

-1.7

3.3

38.2

46.7

Minor BPS

42.6

-0.7

1.8

40.07

Associated Gene:

Gene:

NFIC

Ensembl Gene ID:

ENSAPLG00000023294

Chromosome:

PEDO01009952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039516

21 - 10593

10573