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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_11725_12756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11725 - 12756

Intron Length:

1032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

CTTCTCGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGCCTGCTAATC

Flanking Amino Acid:

QECAKATVDAAPPCTAANPI

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.1

63.8

40.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

82.1

0.72

0.8

76.4

32.2

Minor 5ss

37.7

-1.4

2.9

51.8

38.4

Minor BPS

42.5

-0.5

2.2

52.52

39.1

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067

ENSAPLT00000007281

10900 - 20672

9773