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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_12827_13032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12827 - 13032

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GCCTTCTCACGA

Flanking Amino Acid:

AKKTDGGEINCTNLTVSDSP

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

72.9

34.4

Major BPS

0.87

0.8

85.6

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

38.3

-1.3

3.1

45.3

45.2

Minor BPS

42.2

-0.6

43.3

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067

ENSAPLT00000007281

10900 - 20672

9773