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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_13119_14428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13119 - 14428

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTGTCCTCACCT

Flanking Amino Acid:

FAFNGEFKDKDFAVNVIKST

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

72.4

0.56

73.5

32.5

Major PPT

78.9

0.65

0.8

31.8

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

0.55

1.9

84.2

42.6

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067