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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_13326_14428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13326 - 14428

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

GGTGTTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTATTGTAAAAT

Flanking Amino Acid:

FAFNGEFKDKLVCAGRLLLF

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

73.5

0.53

69.2

46.1

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

47.7

-0

2.4

73.39

43.4

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007281

10900 - 20672

9773