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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_14557_15070_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14557 - 15070

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TCTCCCTGCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCACAA

U12 Branch Point Sequence:

GGGTCACAAACC

Flanking Amino Acid:

VEDPEAGNYNDIHDVRRMKP

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

50.7

0.02

1.2

37.5

Major PPT

68.1

0.41

0.9

61.4

34.9

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

43.4

-0.5

2.1

54.13

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067

ENSAPLT00000007281

10900 - 20672

9773