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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_15198_15488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15198 - 15488

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCAT

5'SS Class:

major

3'SS Sequence:

TTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAACAA

U12 Branch Point Sequence:

CTGCCAACAAGT

Flanking Amino Acid:

PIDVCEIGSKVCSRGEVIKV

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

71.5

39.9

Major BPS

44.8

-0.3

46.9

34.5

Major PPT

0.83

0.7

81.4

30.6

Minor 5ss

32.5

-2

3.4

47.3

48.1

Minor BPS

39.2

-0.7

2.1

55.95

45.6

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067

ENSAPLT00000007281

10900 - 20672

9773