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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_17012_17554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17012 - 17554

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

CCTGATGTAACT

Flanking Amino Acid:

IPRWTNAKMEIATKDPLNPI

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

84.3

0.77

0.8

81.3

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

45.5

-0.2

2.2

63.66

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067

ENSAPLT00000007281

10900 - 20672

9773