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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_20159_20344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20159 - 20344

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TGTTGCTGAGGC

Flanking Amino Acid:

PHSAGYRLFLKDAAGRYISP

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

63.4

35.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

76.9

0.61

0.9

69.4

36.8

Minor 5ss

30.7

-2.2

3.1

41.6

38.8

Minor BPS

44.2

-0.4

2.3

60.02

44.8

Associated Gene:

Gene:

PPA1

Ensembl Gene ID:

ENSAPLG00000006990

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031789

10606 - 20672

10067

ENSAPLT00000007281

10900 - 20672

9773