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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_22348_22674_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22348 - 22674

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ACCAACCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCAAC

U12 Branch Point Sequence:

TGGTCCTACAAG

Flanking Amino Acid:

VFTLVAIAVERFRCIVHPFR

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

54.2

0.1

1.2

62.7

32.2

Major PPT

59.6

0.22

0.9

50.8

32.9

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

45.2

-0.5

2.2

53.08

47.3

Associated Gene:

Gene:

NPFFR1

Ensembl Gene ID:

ENSAPLG00000006956

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041519

21573 - 25872

4300

ENSAPLT00000007211

21573 - 24546

2974