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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_22775_23632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22775 - 23632

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGCAG

5'SS Class:

major

3'SS Sequence:

TCTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAA

U12 Branch Point Sequence:

CCACCCCCAAAG

Flanking Amino Acid:

PTTLVDNLITGWPFDNTMCK

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

56.5

44.1

Major BPS

45.1

-0.3

1.2

48.3

32.9

Major PPT

79.6

0.67

0.9

72.9

37.4

Minor 5ss

24.2

-3

21.1

37.4

Minor BPS

40.9

-0.8

1.9

40.34

42.8

Associated Gene:

Gene:

NPFFR1

Ensembl Gene ID:

ENSAPLG00000006956

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041519

21573 - 25872

4300

ENSAPLT00000007211

21573 - 24546

2974