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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_23924_24875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23924 - 24875

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

TCCACCTCCATT

Flanking Amino Acid:

QALRNPEPSGEPSNGSWANA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

79.3

0.66

0.8

31.7

Minor 5ss

31.6

-2.1

2.7

34.1

41.4

Minor BPS

47.4

-0.1

64.39

46.3

Associated Gene:

Gene:

NPFFR1

Ensembl Gene ID:

ENSAPLG00000006956

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041519

21573 - 25872

4300