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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009962.1_75616_77225_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

75616 - 77225

Intron Length:

1610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTTAGTACC

5'SS Class:

weak_major

3'SS Sequence:

TCTCCGGAGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

CTGCTCTGACCT

Flanking Amino Acid:

SSPPYSLSQRPSVGHIHRRV

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.5

62.2

42.5

Major BPS

69.1

0.47

60.7

37.6

Major PPT

57.4

0.17

1.1

50.1

Minor 5ss

35.2

-1.7

2.5

44.9

Minor BPS

48.5

-0

1.8

65.52

Associated Gene:

Gene:

DNAJB12

Ensembl Gene ID:

ENSAPLG00000007851

Chromosome:

PEDO01009962.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008182

73199 - 83868

10670