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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009993.1_3242_3333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3242 - 3333

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CTTGGCTGATGG

Flanking Amino Acid:

YHLIIELYDRGNIVLTDHEY

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

89.8

0.89

0.7

84.9

29.9

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

37.7

-1

2.3

43.24

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017514

Chromosome:

PEDO01009993.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038710

402 - 5558

5157