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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009993.1_4492_5166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4492 - 5166

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGGTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

GTTTTGGTAACA

Flanking Amino Acid:

DNKTYLIRLQKPDCKATLLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

81.8

29.7

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

71.1

0.47

1.1

65.6

44.4

Minor 5ss

39.7

-1.1

3.1

53.3

37.6

Minor BPS

48.6

-0.1

2.6

71.26

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017514

Chromosome:

PEDO01009993.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038710

402 - 5558

5157