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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009993.1_5236_5433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5236 - 5433

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CCGTGTTTATTG

Flanking Amino Acid:

IRALLAELRRSLLGMRVSNV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

64.1

42.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

-2.3

3.4

45.6

Minor BPS

43.2

-0.6

41.59

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017514

Chromosome:

PEDO01009993.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038710

402 - 5558

5157