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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010004.1_1078_1159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1078 - 1159

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CACCGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGGGCGCTGACC

Flanking Amino Acid:

VALWACPMHKYLRTRWALAW

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

62.1

0.27

0.9

53.9

30.6

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

42.7

-0.5

2.4

54.99

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024295

Chromosome:

PEDO01010004.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047202

21 - 3764

3744