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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010004.1_2075_2184_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2075 - 2184

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACCCACA

5'SS Class:

weak_major

3'SS Sequence:

TCTCCCCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAC

U12 Branch Point Sequence:

ACCCACGCACCC

Flanking Amino Acid:

LRATLCPFSHDAAAWERLWA

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.3

44.9

Major BPS

46.7

-0.2

1.2

41.8

39.2

Major PPT

74.9

0.56

0.9

69.2

31.3

Minor 5ss

44.6

-0.6

2.9

58.6

45.8

Minor BPS

34.2

-1.2

2.2

39.04

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024295

Chromosome:

PEDO01010004.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047202

21 - 3764

3744