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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010004.1_3486_3563_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3486 - 3563

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CCGTGCCCACGG

Flanking Amino Acid:

CSQGLACRLLDADVLCGTEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

74.9

0.56

0.8

69.4

31.2

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

29.4

-1.7

2.2

27.05

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024295

Chromosome:

PEDO01010004.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047202

21 - 3764

3744