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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010004.1_4817_5445_F

Intron Information:

Intron Rank:

140176

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4817 - 5445

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GC-CG

5'SS Sequence:

GGG|GCGGCCGCC

5'SS Class:

weak_major

3'SS Sequence:

TTGCCCCTCACCG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCGGAT

U12 Branch Point Sequence:

TTGCCCCTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.3

53.6

39.4

Major BPS

46.6

-0.2

1.4

42.6

40.4

Major PPT

42.1

-0.4

3.2

35.2

Minor 5ss

25.5

-2.8

4.3

32.3

42.9

Minor BPS

0.01

2.1

68.8

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025388

Chromosome:

PEDO01010004.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035252

4026 - 5675

1650