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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010084.1_73_110_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
73 - 110

Intron Length:
38

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
GCG|GCGGGGGCC

5'SS Class:
major

3'SS Sequence:
CCCGTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTCAC

U12 Branch Point Sequence:
TCCCCGCTCACC

Flanking Amino Acid:
AGCRGGRPVGHYEEIE

Intron Amino Acid Position:
7

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.1
0.36
1.3
65.5
34.2

Major BPS
57.5
0.19
1.1
60.7
37.6

Major PPT
68
0.4
0.8
61
29.2

Minor 5ss
13.8
-4.2
3.9
23.8
37.5

Minor BPS
40
-0.8
2.5
52.17
45.2

Associated Gene:

Gene:
RPS6KB2

Ensembl Gene ID:

Chromosome:
PEDO01010084.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

53 - 2028
1976