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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010084.1_808_918_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
808 - 918

Intron Length:
111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAGGGAGG

5'SS Class:
major

3'SS Sequence:
CCCTTTGCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCCCAG

U12 Branch Point Sequence:
GCTGCTTTGCCC

Flanking Amino Acid:
REGIFLEDTACFYLSEITLA

Intron Amino Acid Position:
75

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.1
57
47.3

Major BPS
39.5
-0.6
1.5
43.7
39.4

Major PPT
77.6
0.62
0.8
72
32.6

Minor 5ss
30.4
-2.2
3.3
36
43.1

Minor BPS
40.9
-0.7
3.4
57.52
42.2

Associated Gene:

Gene:
RPS6KB2

Ensembl Gene ID:

Chromosome:
PEDO01010084.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

53 - 2028
1976

311 - 2050
1740

101 - 2050
1950