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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010097.1_3375_4258_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3375 - 4258

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCACCC

5'SS Class:

major

3'SS Sequence:

CGGGCACCACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAG

U12 Branch Point Sequence:

GTGTCCCCAGCT

Flanking Amino Acid:

PAQPIPFSRQLLFPAAPRAP

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.2

50.6

40.7

Major BPS

44.4

-0.3

1.6

54.3

42.9

Major PPT

51.8

0.04

41.1

38.5

Minor 5ss

32.3

-2

3.2

43.4

43.7

Minor BPS

47.6

-0.1

2.1

70.29

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005852

Chromosome:

PEDO01010097.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006049

425 - 4498

4074