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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010115.1_211_531_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

211 - 531

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGAGAGG

5'SS Class:

weak_major

3'SS Sequence:

GCCCCCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

GGGTCCTGAGCC

Flanking Amino Acid:

EGAGGEDPQNGLSIPPPAAA

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.12

1.1

44.6

44.7

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

71.6

0.49

0.8

61.1

35.1

Minor 5ss

23.7

-3

3.1

37.7

Minor BPS

52.5

0.06

1.8

61.37

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020851

Chromosome:

PEDO01010115.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028011

162 - 1406

1245