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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010126.1_8776_8889_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8776 - 8889

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGA|GCAGGGCTG

5'SS Class:

weak_major

3'SS Sequence:

TGCAGCCTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

CCATCAGTAACC

Flanking Amino Acid:

MVQRAQQVLTQPTT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

55.9

41.5

Major BPS

64.7

0.37

1.3

74.7

Major PPT

59.4

0.21

1.1

50.4

43.8

Minor 5ss

23.9

-3

4.3

33.9

42.9

Minor BPS

47.8

-0.1

2.3

60.03

44.9

Associated Gene:

Gene:

VPREB3

Ensembl Gene ID:

ENSAPLG00000017731

Chromosome:

PEDO01010126.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040828

8455 - 8901

447