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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010159.1_72_649_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

72 - 649

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTCGGCTA

5'SS Class:

weak_major

3'SS Sequence:

TGGTGGCCGGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTGGT

U12 Branch Point Sequence:

TGGCCCTCGCCG

Flanking Amino Acid:

PVGTGQGAPAGQPPLQRRVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

52.8

45.6

Major BPS

26.2

-1.5

4.1

47.8

Major PPT

53.1

0.07

1.1

47.5

41.6

Minor 5ss

29.2

-2.4

3.3

31.3

42.5

Minor BPS

36.9

-1.1

3.5

49.23

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024561

Chromosome:

PEDO01010159.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023725

13 - 1225

1213