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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010169.1_5846_5947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5846 - 5947

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAG

U12 Branch Point Sequence:

GGATGCAGACCC

Flanking Amino Acid:

SSTWGHLAVKACLQLFQALP

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

50.2

0.01

1.5

54.7

43.1

Major PPT

75.8

0.58

0.9

65.9

40.9

Minor 5ss

30.3

-2.3

3.5

Minor BPS

38.5

-0.9

2.1

47.03

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021821

Chromosome:

PEDO01010169.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031257

21 - 7414

7394