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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010169.1_6887_7248_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6887 - 7248

Intron Length:

362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

GGTACCATGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

GGCACCCCAATT

Flanking Amino Acid:

RCLHSLRLFAGSTTRRCREQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

65.4

40.4

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.18

1.1

51.4

42.5

Minor 5ss

29.1

-2.4

3.5

32.5

42.6

Minor BPS

45.6

-0.2

1.9

59.71

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021821

Chromosome:

PEDO01010169.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031257

21 - 7414

7394