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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010176.1_629_1797_F

Intron Information:

Intron Rank:

143706

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

629 - 1797

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGTATCA

5'SS Class:

weak_major

3'SS Sequence:

TTTCTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTTCTGTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.4

55.1

38.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

84.4

0.77

0.8

79.4

32.6

Minor 5ss

32.3

-2

3.1

40.5

45.2

Minor BPS

49.1

-0

2.4

72.02

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027436

Chromosome:

PEDO01010176.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022208

21 - 2363

2343