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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_37784_38056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

37784 - 38056

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTGC

5'SS Class:

major

3'SS Sequence:

CCTTTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

CTTTCCCCACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

60.1

41.9

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

78.4

0.64

0.7

72.4

25.9

Minor 5ss

37.4

-1.4

3.3

49.7

46.9

Minor BPS

42.9

-0.6

2.2

53.67

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024164

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035940

31152 - 39146

7995

ENSAPLT00000022866

31152 - 40844

9693

ENSAPLT00000020955

31152 - 38371

7220