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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_38372_39119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

38372 - 39119

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGGG

5'SS Class:

major

3'SS Sequence:

CTCCCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

ACTGCCTGATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.1

51.7

45.2

Major BPS

0.27

1.3

53.3

44.2

Major PPT

73.4

0.53

0.8

64.8

30.7

Minor 5ss

27.6

-2.6

3.6

38.4

46.6

Minor BPS

45.5

-0.2

2.1

62.75

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024164

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035940

31152 - 39146

7995