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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_69070_69169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

69070 - 69169

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

CCCCCCCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTCTCACTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.9

39.3

Major BPS

0.87

0.8

85.6

Major PPT

60.5

0.24

0.9

58.8

23.5

Minor 5ss

28.3

-2.5

36.1

40.2

Minor BPS

54.6

0.13

72.1

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005