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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_69343_69432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69343 - 69432

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

GACGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGGAT

U12 Branch Point Sequence:

GGATCCTGAGAT

Flanking Amino Acid:

LLTRALAQATGRQLAQIRSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

41.7

Major BPS

66.4

0.41

1.4

65.3

43.7

Major PPT

62.7

0.29

0.9

54.6

36.2

Minor 5ss

31.4

-2.1

3.5

43.4

43.9

Minor BPS

48.8

-0

1.8

65.63

43.6

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005