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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_69600_69691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69600 - 69691

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

TTGGGTTTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAG

U12 Branch Point Sequence:

GGGGTGCCAGCG

Flanking Amino Acid:

REMATMSGNASANKKIGIIK

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

57.1

42.2

Major BPS

38.3

-0.7

1.7

43.9

48.6

Major PPT

74.6

0.55

68.8

41.9

Minor 5ss

29.4

-2.4

3.1

37.2

40.3

Minor BPS

27.6

-1.8

25.18

35.4

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005