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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_70161_70406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70161 - 70406

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGTGC

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGACAT

U12 Branch Point Sequence:

ACATGGGGACAA

Flanking Amino Acid:

EQSRILKQTFCELPDYAAIV

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

62.6

38.6

Major BPS

43.9

-0.3

1.4

46.4

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

31.8

-2.1

3.2

37.8

42.4

Minor BPS

25.2

-1.8

2.4

32.02

35.6

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005