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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_70493_70584_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70493 - 70584

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGCGG

5'SS Class:

major

3'SS Sequence:

CCCCCCCCTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

CCGGCCTCATCC

Flanking Amino Acid:

KLPQHCGITPGVPLKPMLAQ

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

48.2

47.5

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

59.9

0.22

55.9

27.9

Minor 5ss

29.1

-2.4

3.4

39.2

Minor BPS

45.2

-0.3

1.9

49.71

46.9

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005