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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_70701_70790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70701 - 70790

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGCTT

5'SS Class:

major

3'SS Sequence:

CCCCCACCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTCCCCCCCACC

Flanking Amino Acid:

EYKYDGERAQIHVLESGAVF

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.2

74.6

41.5

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

64.1

0.32

0.8

53.8

29.8

Minor 5ss

-1.9

3.4

47.6

Minor BPS

44.7

-0.4

2.2

61.18

43.8

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005