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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_71492_71588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71492 - 71588

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGAG

5'SS Class:

major

3'SS Sequence:

TGGGTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACGAT

U12 Branch Point Sequence:

CCCCGGGTGACG

Flanking Amino Acid:

VSEFLDKAIKASCEGLMVKT

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

59.3

41.8

Major BPS

48.7

-0

1.4

46.5

46.6

Major PPT

61.5

0.26

50.8

43.9

Minor 5ss

29.8

-2.3

3.2

43.5

Minor BPS

31.2

-1.6

2.5

30.75

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005