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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_71672_71746_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

71672 - 71746

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCGAG

U12 Branch Point Sequence:

GGTCTCCGAGCC

Flanking Amino Acid:

IAKRSHKWLKLKKDYLDGLG

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

-0.4

1.6

41.5

41.3

Major PPT

0.88

0.6

81.6

30.5

Minor 5ss

32.6

-2

3.4

46.8

48.5

Minor BPS

41.8

-0.6

1.9

51.43

38.5

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005