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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_72031_72110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72031 - 72110

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGACTTG

5'SS Class:

major

3'SS Sequence:

TGTCACCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

GGCTCCTGATGC

Flanking Amino Acid:

SLEKHYGFLKEHVLAQPRPY

Intron Amino Acid Position:

507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.1

59.1

42.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

73.5

0.53

0.9

62.9

39.3

Minor 5ss

-1.1

3.4

54.5

49.7

Minor BPS

45.3

-0.3

52.74

44.3

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005