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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010218.1_72255_72342_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

72255 - 72342

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GGGTGTCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

GGCATCTCAGCC

Flanking Amino Acid:

SPVYRAAVGLVDEEKGISLR

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

50.1

1.1

45.4

41.8

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

44.3

-0.4

1.7

48.8

40.8

Associated Gene:

Gene:

LIG1

Ensembl Gene ID:

ENSAPLG00000013201

Chromosome:

PEDO01010218.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013746

68990 - 72994

4005