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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010241.1_1994_3916_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1994 - 3916

Intron Length:

1923

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCACAGCC

5'SS Class:

weak_major

3'SS Sequence:

GTTCAGCCGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

GTTTGTTCAGCC

Flanking Amino Acid:

SAWLVGLRCSVVAVLGSTTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.3

38.9

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

-0.2

1.7

51.1

43.6

Minor 5ss

22.5

-3.2

3.9

31.3

36.2

Minor BPS

46.8

-0.2

2.1

63.25

42.4

Associated Gene:

Gene:

CAVIN1

Ensembl Gene ID:

ENSAPLG00000007515

Chromosome:

PEDO01010241.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007789

1239 - 4157

2919