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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010297.1_942_1049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

942 - 1049

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTGCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

ATCCAAATAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

41.8

Major BPS

62.4

0.31

32.1

Major PPT

76.3

0.59

0.9

72.9

37.4

Minor 5ss

32.4

-2

3.1

40.6

45.3

Minor BPS

-0.4

58.05

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027609

Chromosome:

PEDO01010297.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034122

894 - 2291

1398