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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010308.1_3605_3868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3605 - 3868

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCTT

5'SS Class:

strong_major

3'SS Sequence:

GTCATTTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTTTCTGTCATT

Flanking Amino Acid:

YYNVDMLKYQVSAQGIQSTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

73.6

Major BPS

68.7

0.47

0.9

67.9

Major PPT

60.7

0.24

1.2

63.3

Minor 5ss

35.6

-1.6

3.7

55.9

48.3

Minor BPS

53.6

0.19

2.4

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029825

Chromosome:

PEDO01010308.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047930

2213 - 3961

1749