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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010347.1_325_548_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

325 - 548

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGGGGG

5'SS Class:

weak_major

3'SS Sequence:

ATTTCCTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AATGTCCTAATT

Flanking Amino Acid:

VHSKKVRGRRCTLKFIIFC*

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

45.2

42.5

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.7

0.71

0.8

73.7

36.2

Minor 5ss

31.2

-2.1

3.3

35.3

43.4

Minor BPS

54.4

0.22

1.7

71.79

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030025

Chromosome:

PEDO01010347.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025076

297 - 1249

953