Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010350.1_268_343_F

Intron Information:

Intron Rank:

148600

Intron Class:

major

Intron Phase:

Intron Coordinates:

268 - 343

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGCAGC

5'SS Class:

major

3'SS Sequence:

CCTTCACTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

AGCACCTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

64.9

41.2

Major BPS

62.7

0.32

1.2

39.8

Major PPT

0.68

0.8

73.4

30.3

Minor 5ss

40.4

-1.1

2.8

51.6

45.2

Minor BPS

0.33

1.8

71.97

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030006

Chromosome:

PEDO01010350.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043622

21 - 984

964

ENSAPLT00000041786

21 - 984

964