Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01010354.1_410_1593_R

Intron Information:

Intron Rank:

153744

Intron Class:

major

Intron Phase:

Intron Coordinates:

410 - 1593

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

CCCCCCACCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

ATTACCCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

60.6

44.5

Major BPS

0.42

1.1

38.5

Major PPT

63.9

0.31

0.8

53.9

29.3

Minor 5ss

38.7

-1.3

44.2

43.2

Minor BPS

67.1

0.61

1.7

84.33

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030206

Chromosome:

PEDO01010354.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033234

334 - 1938

1605